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KONECT > Networks > Human protein (Stelzl)

Human protein (Stelzl)

About this network

This network represens interacting pairs of protein in Humans (Homo sapiens).

Network info

CodeMS
Category Metabolic
Data source http://research.mssm.edu/maayan/datasets/qualitative_networks.shtml
Vertex type Protein
Edge type Interaction
FormatDirected: Edges are directed Directed
Edge weightsUnweighted: Simple edges Unweighted
Metadata Loops:  An edge may connect a node with itself Loop
Size1,706 vertices (proteins)
Volume6,207 edges (interactions)
Average degree (overall)7.2767 edges / vertex
Fill0.0021327 edges / vertex2
Maximum degree189 edges
Reciprocity97.8%
Size of LCC1,615 vertices
Size of LSCC1,493 vertices
Wedge count49,920
Claw count5,644,533
Triangle count96
Square count15,969
4-tour count333,742
Power law exponent (estimated) with dmin2.3810 (dmin = 6)
Gini coefficient58.9%
Relative edge distribution entropy89.8%
Assortativity–0.19160
Clustering coefficient0.577%
Diameter13 edges
90-percentile effective diameter6.97 edges
Mean shortest path length5.09 edges
Spectral norm35.012
Algebraic connectivity0.051259
Degree distribution of the Human protein (Stelzl) network
Degree distribution
Outdegree distribution of the Human protein (Stelzl) network
Outdegree distribution
Indegree distribution of the Human protein (Stelzl) network
Indegree distribution
Degree distribution of the Human protein (Stelzl) network
Degree distribution
Outdegree distribution of the Human protein (Stelzl) network
Outdegree distribution
Indegree distribution of the Human protein (Stelzl) network
Indegree distribution

Out/indegree comparison

Out/indegree comparison of the Human protein (Stelzl) network
Out/indegree comparison
Degree distribution of the Human protein (Stelzl) network
Degree distribution
Outdegree distribution of the Human protein (Stelzl) network
Outdegree distribution
Indegree distribution of the Human protein (Stelzl) network
Indegree distribution
Degree distribution of the Human protein (Stelzl) network
Degree distribution
Outdegree distribution of the Human protein (Stelzl) network
Outdegree distribution
Indegree distribution of the Human protein (Stelzl) network
Indegree distribution
Clustering coefficient distribution of the Human protein (Stelzl) network
Clustering coefficient distribution
Distance distribution of the Human protein (Stelzl) network
Distance distribution
Distance distribution on a logistic scale of the Human protein (Stelzl) network
Distance distribution on a logistic scale
Top-k eigenvalues of A of the Human protein (Stelzl) network
Top-k eigenvalues of A
Top-k eigenvalues of N of the Human protein (Stelzl) network
Top-k eigenvalues of N
Top-k eigenvalues of L of the Human protein (Stelzl) network
Top-k eigenvalues of L
Spectral distribution of the eigenvalues of A of the Human protein (Stelzl) network
Spectral distribution of the eigenvalues of A
Spectral distribution of the eigenvalues of N of the Human protein (Stelzl) network
Spectral distribution of the eigenvalues of N
Spectral distribution of the eigenvalues of L of the Human protein (Stelzl) network
Spectral distribution of the eigenvalues of L
Cumulative spectral distribution of A of the Human protein (Stelzl) network
Cumulative spectral distribution of A
Cumulative spectral distribution of N of the Human protein (Stelzl) network
Cumulative spectral distribution of N
Cumulative spectral distribution of L of the Human protein (Stelzl) network
Cumulative spectral distribution of L
Eigenvectors of A of the Human protein (Stelzl) network
Eigenvectors of A
Eigenvectors of L of the Human protein (Stelzl) network
Eigenvectors of L
Complex eigenvalues of the asymmetric adjacency matrix of the Human protein (Stelzl) network
Complex eigenvalues of the asymmetric adjacency matrix

Layout

Layout of the Human protein (Stelzl) network
Layout

Downloads

TSV file:downloadmaayan-Stelzl.tar.bz2 (19.69 KiB)

References

[1] Human protein (stelzl) network dataset -- KONECT, October 2016. [ http ]
[2] U. Stelzl, U. Worm, M. Lalowski, C. Haenig, F. H. Brembeck, H. Goehler, M. Stroedicke, M. Zenkner, A. Schoenherr, S. Koeppen, J. Timm, S. Mintzlaff, C. Abraham, N. Bock, S. Kietzmann, A. Goedde, E Toksöz, A. Droege, S. Krobitsch, B. Korn, W. Birchmeier, H. Lehrach, and E. E. Wanker. A human protein--protein interaction network: A resource for annotating the proteome. Cell, 122:957--968, 2005.

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